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![photo_2024-08-14_17-09-27](https://github.com/user-attachments/assets/b25e58c9-b043-4fe5-804a-0d3c7a8522d2)
![photo_2024-08-14_17-09-20](https://github.com/user-attachments/assets/2f6ae6f0-9bd5-4bc…
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> > No observable difference with standard GTC input.
>
> I don't observe any difference in the QC_Report.docx. But we do see differences in the corresponding Plink files created (BED…
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After running `standardrb --fix` I still get this repeating error. I don't feel I understand this well enough to mess with it.
```
(base) simonc@Simons-15-MBA-225 ruby-flightplans % standardrb …
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Hi Jody,
I have just been running tbprofiler with some samples using VCF as the input (it is ONT data I have variant-called with Clair3). Forgive me if I have missed it somewhere but there doesn't …
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Hi! I'm trying to obtain a bcf using this command:
```
$pth_angsd/angsd \
-GL 2 \
-out $pth_o/$o_name \
-rf $bedfile \
-nThreads $threads \
-snp_pval 1e-6 \
-doPost 1 \…
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hi author, when i build&run your test code, it raised some errors such as: ‘kputd’ was not declared in this scope; ‘bcf_has_variant_types’ was not declared in this scope. where did the error come fr…
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There is a lot of shared code between bcf v2 and v3 and we should move it to some common place so it will be possible to maintain it in a more sane way, now every change should be implemented twice re…
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Hi,
The final vcf is giving me these errors when I look at it with bcftools:
[W::bcf_hrec_check] Invalid tag name: "'SampleID'"
[W::bcf_hrec_check] Invalid tag name: "Compound_htz(sample)"
[W::b…
gevro updated
2 months ago
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when i add the BCF-API swagger.json as an openAPI service reference in visual studio (.NET) i get compile errors from the generated code :/
![image](https://github.com/user-attachments/assets/1b4cb…