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@rasi, @gquarter has generated some results from her GO analysis using the splicing CRISPR screen data, see [here](https://cbl-gorilla.cs.technion.ac.il/GOrilla/zctdtiao/GOResults.html). Do you have a…
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Hi, a colleague of mine performed a differential compartment analysis between a CRISPRi and scrambled control experiment using dcHiC. He provided me with a bedgraph file for the full compartment detai…
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Hi,
I used Flute as a follow up to the mageck pipeline (mageck count -> mageck mle). In comparison to the mle values, the Flute normalization by cell cycle increases the absolute value of the beta s…
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Thanks for making this tool available. It was recommended to me by a colleague. I'm new to this kind of analysis and was just curious about the advantages/disadvantages of this tool compared to the M…
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New projects (3):
1. [Dandelion uses the single-cell adaptive immune receptor repertoire to explore lymphocyte developmental origins](https://data.humancellatlas.org/explore/projects/a83b7f45-bfb1-4c…
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### Project short name:
MultimodalSquamousCarcinoma
### Primary Wrangler:
Ida
### Secondary Wrangler:
### Associated files
* Google Drive: [folder](https://drive.google.com/drive/folders/1fm0TgR…
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From: Anne Carpenter
Date: Fri, Dec 1, 2023 at 2:44 PM
Hi Ardigen/Ksilink,
Using this attached plot from Ardigen of the top 25 most anti-correlated pairs, I saw MYT1-RNF41.
So, I found someon…
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This issue will collect all feedback submitted via the feedback form at the end of each tutorial
----
Results have been [aggregated](https://nbviewer.jupyter.org/github/bebatut/galaxy-training-m…
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Core features:
- [x] #28
- [x] #42
- [x] #12
- [x] #30
___
## **CRISPR screen assays**
Irrespective of the CRISPR screen platform used upstream, there are various experimental assays. For…
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- [x] Discuss problem definition with @nick-youngblut
- [x] Perform exploratory and test data analysis on existing datasets
- [This repo](https://github.com/abearab/ScreenPro-Benchmarking)
- [x] …