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Should limit numpy requirement to breaches_starts = wstart + (breaches > 0).nonzero()[0]
E ValueError: Calling nonzero on 0d arrays is not allowed. Use np.atleast_1d(scalar).nonzero() in…
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Hi,
I'm using blobtools version 1.1.1 and running this command on the example:
blobtools create -i example/assembly.fna -b example/mapping_1.sorted.bam -t example/blast.out -o example/test --nodes …
ginac updated
3 years ago
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- start codon and stop codon dist can be obtained from genome sequence
- GC content as well
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Hi there,
It is normal to loss considerable N50 length after the correction step?, in my case when from N50 13000 to N50 7000
I have about 40X of coverage bellow my pre_assembly_stats.json and fc_r…
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It may be hard to tell why certain resources are still held when interacting `ctr`. Make a tool that lists references for a given piece of content.
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Present in nf-core multiqc report:
- fastqc metrics, including GC content
- mapping percentages (bowtie2)
- reads passing filters (cutadapt)
- trimmed sequence lengths (cutadapt)
- unique/multima…
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I do daily TF export and do some comparison to check if any changes in the file exists.
Many of GC Object resources content order is not the same if I do the export again in the next day, even with o…
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Hi,
I am trying to run GCparagon with singularity and I get the following error:
Traceback (most recent call last):
File "/opt/conda/envs/GCparagon/bin/gcparagon", line 8, in
sys.exit(m…
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The ability to assign multiple items to the same name grid area and for the grid to work,
currently, it draws all the named grid areas on top of each other in the order encountered in the grid contai…
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