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I am just going to make a start here:
Based on our current aims see #8
We want to know, if there is an relationship between Social Distancing Score for Grampian (SDS-G) and Covid related variab…
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### Name
Simplus Grid Tool
### Screenshots
### Focus Topic
Stability, d…
yt-li updated
7 months ago
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```r
# insert reproducible example here
```
I tried to calculate the pathway scores using a list of genes for my xenium data in R, by using the addmodulescore function in seurat. bu…
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Hi there!
I would like to apply Cellchat spatial analysis on CosMX data.
```
#READ SLIDE DATA AND SELECT SPECIFIC FOV
nano.obj__3_filter = readRDS("nano.obj__3_filter.RDS")
seurat_object
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Hi,
Wonderful job!
I have searched through many articles and am looking for a Shiny app that can handle spatial transcriptomics data in a similar manner to how [Shinycell](https://github.com/SGDDN…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/RoseYuan/poem
Confirm the following by editing ea…
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Hello, my data is from the spatial transcriptome. There are three biological repetitions in the experimental group and the control group respectively. Can I use three experimental groups to create a c…
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*Please refer to our [FAQ](https://ark-analysis.readthedocs.io/en/latest/_rtd/faq.html) and look at our [known issues](https://github.com/angelolab/ark-analysis/issues) before opening a bug report.*
…
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Hi all,
(Co-opening in `rioxarray` due to the raster nature of the accessor: https://github.com/corteva/rioxarray/issues/687)
As in https://github.com/pydata/xarray/issues/8040 for DEMs, writing…
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### Primary Contact
kimberly.hyde@noaa.gov
### Secondary Contact
_No response_
### Data Name (This will be the displayed title in Catalog)
Phytoplankton
### Indicator Name (as exists…