-
https://github.com/michaelwitting/RepoRT/blob/713272555428663cf8de4a2e93b0accb0f3c55f1/raw_data/0260/0260_metadata.yaml#L7
The associated tsv file has to be corrected as well.
-
Hi,
Could you please provide me with the two-species spectral library (.tsv format is better) mentioned in your published paper "DIA-NN: Neural Networks and Interference Correction Enable Deep Prot…
-
### Description of feature
The workflow currently returns a `ERROR ~ Invalid CSV value -- offending line:` error if a TSV file is provided to `--input` instead of a CSV file. For example:
```
ERR…
pcrxn updated
2 months ago
-
Hi I installed the package inside my miniconda and I am working in the (ms proteomics) environment within the cd of my report.tsv from DIA-NN.
However
(msproteomics) (msproteomics) PS D:\Data\Dom…
-
I could not get the chromsizes.tsv data from human. It there anyone could help? thanks in advance.
scenicplus prepare_data download_genome_annotations --species "hsapiens" --genome_annotation_out_fna…
-
Could you clarify what data is contained in `spl.tsv`? Are they the name of column in bcf/vcf? Tumor-ID, Control-ID?
And can you upload the `svs.bed`?
Thanks,
Coax
-
On the Collection/EPICollection pages, if a contributors.tsv file is uploaded, ensure that it is using the latest version of the CEDAR template for contributors by using the new `latest-cedar-version`…
-
```
curl -X POST -H "Content-Type: application/x-www-form-urlencoded" -d 'result=read_run&query=tax_eq(9606)&fields=run_accession%2Ctax_id%2Cfastq_bytes%2Csra_ftp%2Csample_accession%2Cexperiment_acce…
-
DuckDB will automatically use gzip/zstd to decompress files with a standard extension like .csv.gz, so we can easily add support for opening these in the data explorer. Based on the size of the file, …
-
Mappings are available for both UniRef90 and UniRef50 gene families to the following systems:
MetaCyc Reactions
KEGG Orthogroups (KOs)
Pfam domains
Level-4 enzyme commission (EC) categories
E…