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Hello,
Thanks for your development and sharing of Clinica; it's a very useful tool.
Recently, while attempting the "dwi-preprocessing-using-t1" pipeline without utilizing CUDA, I encountered an …
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Hi,
I am receiving the following runtime error whenever I try to import the package. Here's how I try to import it
`from mni_to_atlas import AtlasBrowser`
```
Traceback (most recent call las…
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Hi,
I am running the following commands through a Jupyter Notebook from Anaconda 4.6.8 on Windows 10:
bids_dir = "C:/Users/myself/DevArea/ds-supermri/bids"
layout = BIDSLayout(bids_dir)
The …
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### What happened?
aCompCor mask may include gray mask voxels for some participants. It appears the procedure "_a mask of pixels that likely contain a volume fraction of GM is subtracted from the aCo…
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this issue is a stub for discussing support of duecredit in Matlab. Should be quite doable (may be without fancy decorators and injections, just collect and store to e.g. json or any other format for…
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Hi,
I tried running RABIES on the token dataset as well as the test dataset. Both times, it ran to completion. I then tried it on my own resting state fMRI data of dimensions 64x64x16x1350. Using t…
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## Summary
I'm getting an error that's presumably related to freesurfer but I have no idea on how to troubleshoot.
## Additional details
- xcp_d version: 0.6.4 (latest version Mar 14/2024)
- Doc…
mgirn updated
4 months ago
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### What happened?
I ran mriqc using the docker version on one participant and received the error code: exception calling callback for
I am running the latest docker version on a Mac Studio with …
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**Describe the bug**
dwi-preprocessing pipeline fails with the below errors. The images have earlier been processed with the adni to bids converter.
**To Reproduce**
`clinica run dwi-preprocessin…
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### What happened?
fmriprep crashes when I include --cifti-output 91k. It works fine when I remove that argument.
### What command did you use?
```shell
apptainer run --containall --cleanenv -B myd…