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The code here:
https://github.com/imglib/imglib2/blob/7e37c9b10cc044a4951902116703f1faa7dc1c78/src/main/java/net/imglib2/util/ImgUtil.java#L318
... is very clean and simple, but it's missing a c…
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Now that we have `Roi Mask[Predicate]` and `Overlay ROITree` converters, let's make them all accessible via script parameters.
* [x] `ij.ImagePlus` with alias `ImagePlus`
* [x] `ij.gui.Overlay…
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This is my code:
```python
import scyjava as sj
def print_classpath():
System = sj.jimport('java.lang.System')
import re
classpath = re.split('[:;]', str(System.getProperty('java.c…
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Currently AWTDisplayController is responsible for creating BufferedImages that are displayed in an ImageCanvas. The call to AWTDisplayController::update() creates a BufferedImage from the Dataset that…
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It would be nice to be able to have an object which is `Iterable` but not necessarily an `Interval` or `RealInterval`. So far we have been using Java's `Iterable` class, but we want to extend it to su…
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It would be nice if, when passed an `ImgPlus` (or wrapping `Dataset`) with dimensions not in XYCZT order, we automatically permuted them to XYCZT since that is the order required/assumed by ImageJ 1.x…
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How could we extend JavaCall to allow passing of multidimensional arrays? E.g.
```java
public class Test {
public static double[][] testDoubleArray2D(double[][] array) {
return array…
davnn updated
2 years ago
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reprinting tasks from [this Zulip message](https://imagesc.zulipchat.com/#narrow/stream/329366-.5B2022-09.5D-Fiji.2BNGFF-Prague-hackathon/topic/stream.20events/near/287690127):
- [ ] *read* chunks …
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Some tutorials are broken because of the changes in ops signature.
See this one for example : https://github.com/imagej/imagej-scripting/blob/master/src/main/resources/script_templates/Tutorials/Si…
hadim updated
7 years ago
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Hi Tobias and Stephan,
I want to resave an HDF5 dataset into .tiff. Via Multiview Reconstruction > Batch Processing > Resave > As TIFF. But Fiji keeps on crashing after about 16-18 time points. Fiji …