-
Nifti files have a small header and they can be checked for compliance. Add it to bids_dataset compliance check
-
@GaelVaroquaux,
I have a bunch of general-purpose atlas-handling functions from PyNets that would probably be better to outsource to Nilearn at some point. Currently, my time is very limited for P…
-
### Feature description
Read medical images as DICOM and not just NIFTI.
### Describe the solution
Right now it uses NIFTI, but DICOM is a more common standard. So just having another layer that re…
-
Hi,
I am getting the following error after I ran `cmake .` and `make` in the `src/DTB` folder:
```bash
[ 25%] Linking CXX executable DTB_gfa
Undefined symbols for architecture x86_64:
"_Xzn…
-
Many times our functional data has already been aligned to the t1 anatomy. We should use nifti headers for alignment between the functionals and the 3D anatomy
-
Hi all,
Thank you for all your incredible work!
I am hoping to use the SurfaceViewer in [our lab](http://neuroimaging.tau.ac.il/)'s website, and I was wondering whether there's some sort of recomm…
-
Hi, your code is really helpful, but I didn't understand how you can reconstruct the mask after your applied the model. Because you're taking just the images with a lesion, but then you should be able…
-
[dcm2niix issue 718](https://github.com/rordenlab/dcm2niix/issues/718) appears to suggest that the itksnap tools have issues with NIfTI spatial transforms.
To replicate a minimal example, you consi…
-
example:
```python
import nibabel as nib
nifti_volume = nib.load(FILE_REFERENCE)
# create new nibabel object
segmented_nifti = nib.Nifti1Image(NUMPY_ARRAY, nifti_volume.affine)
# save
nib.sav…
-
- I am trying to convert Bruker CSI data to Nifti. Everything looks OK, except for the excited CSI grid. How I can store it in Nifti? Do you think it is possible? should I use a sidecar file like json…