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@ppavlidis wanted to have the discrete geeq fields removed from the dataset endpoints. However the wrapper packages uses some components, so ideally they would be replaced. These fields are
- geeq.…
oganm updated
7 months ago
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I think it's likely that there is a general expression pattern for how mutated a tumor is. For example, super mutated tumors may have wacky gene expression, solely because they're super mutated and no…
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Thank you for presenting and also including a detailed method appendix in the end! This is a really cool research project!
Kind of building on #2 where the use of twitter might be particularly pola…
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A local user wanted to discard volumes during prestats stage with:
```
prestats_dvols[1]=4.
```
The number of volumes of the fmri are properly discarded, however removetaskpnts.R is not restori…
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Thanks for putting these notes up. Thought it'd make sense to create an issue to track keyboard backlight control.
My keyboard backlight just pulses continuously, and has since the moment I turne…
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I have read your paper with great interest and was looking into running the code in this repository on my own machine. Unfortunately, when running the code in `sim_exp.py` (or `main.py`) out-of-the-bo…
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**Survey:**
- Be careful about collecting IP address, although I note that you used a UBC hosted platform to comply with privacy policy
**EDA**
- Good summary of the data and description.
- In g…
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**Describe the bug**
fmriprep has updated confound names see poldracklab/fmriprep#1343, so NiBetaSeries should be using the confounds in line with [the spec](https://bids-specification.readthedocs.io…
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Since we can't evaluate the performance of observational causal inference directly via cross-val, one approach to deciding which algorithm and approach to use is to test how the options perform on syn…
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Agresti categorical data analysis, 2nd, 2003, section 2.3 on stratified 2x2xK tables
has good discussion on other explanatory (confounding) variables and Simpson's paradox
He doesn't mention (as fa…