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cf. #15.
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I have data that I've processed (successfully) using `v 3.0.3`. The data is converted to MIF with the gradient table and passed to `dwifslpreproc` and then `dwibiascorrect` without issue. I upgraded t…
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### Your idea
In fMRIPrep, we generate `_boldref.nii.gz` files from some combination of the source bold file, an associated sbref (if available) and within-space transforms (such as SDC warp). This i…
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Hi! It appears that there are many dMRI scans missing from the baseline, 2_year and 4_year datasets. The baseline and 2_year (~4k each). Would it be helpful to share a list of missing IDs with you via…
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Hi,
I started with trying the new SS3T-CSD, using the pipeline https://3tissue.github.io/doc/single-subject.html, (except did not do bias field, and will be using a dilated binary brain mask derived …
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Each feature name should be informative but as brief as possible especially considering the display in the explorer.
EDT: Feature names need to be reworked for the next release of siibra-explorer
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### What would you like to see added in this software?
With 23.2.1, it doesn't look like PNG figures are collected by Nireports, even when I specify the extension field as `.png` or `png`. If possibl…
tsalo updated
1 month ago
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Hi
Is there an equivalent option available for _ss3t_csd_ that the _-threshold_ option plays for the MrTrix CSD script _dwi2fod msmt_csd_?
I want to play around with the -threshold option to mod…
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## Project info
**Title:**
Try Data Carpentry Neuroimaging
**Project lead:**
Erin Dickie @erin.w.dickie
Olivia Stanley @ostanley
Michael Joseph @josephmje
Jerrold Jeyachandra @jerdra
J…
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### Summary
New to nipype and running the following script
### Actual behavior
This is the error I get when I run
```
/home/shree/.local/lib/python3.6/site-packages/niflow/nipype1/workflo…