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My BWEEMS friend Anamica (https://github.com/NankaBD) is looking for support with the following problem:
"Is anyone here familiar with PacBio raw reads? I am struggling to understand how to downloa…
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**Submitting author:** @wrightaprilm (April Wright)
**Repository:** https://github.com/wrightaprilm/treesiftr
**Version:** v1.0.0
**Editor:** @juanklopper
**Reviewer:** @ethanwhite, @rachelss
**Archiv…
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This issue will document the rolling results.
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The first sneak peak is **all** [437 Nanopore isolates](https://github.com/mbhall88/drprg-paper/issues/1) and 400 Illumina isolates (selected at…
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## Solution
The problem is due to a bug in HMMER `v3.3.1`. If you downgrade it the following way, the error will be resolved:
```
conda install -c bioconda hmmer=3.2.1
```
## Short descript…
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Hello,
Hopefully I am using the right words here. Is there a way to get at which minhashes are driving each split in the cluster (or the larger groups). I went through the Hash website and I think …
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Hi, we received a use case from the NIST genome editing consortium.
> I want to convince NIST that it's useful to think about ontologies, and they should comply with standards for EBI deposition la…
FuqiX updated
2 years ago
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I'm trying to use gather-by-contig.py to decontaminate yet another nematode genome assembly. It should sort of work with sourmash 2.2.0, but that version of sourmash is not capable of running gather-…
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## Change term
* Submitter: @jegelewicz
* Justification (why is this change necessary?): The definition of MaterialSample is essentially the same as that for PreservedSpecimen. Members of the Arct…
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I've added this to tomorrow's LIS agenda, but in the interest of keeping track of things with issues, here's the demo:
http://dev.lis.ncgr.org:50030/collections/Arachis/hypogaea/
The idea being …