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This is to discuss outstanding issues for Tip 1, on whether Deep Learning should be used in the first place, https://github.com/Benjamin-Lee/deep-rules/blob/master/content/03.ml-concepts.md. Related t…
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Hi,author:
I tried to run In-domain bioactivity prediction experiments on pQSAR-ChEMBL, but I encountered an error as follow:
![DATA_PATH](https://github.com/user-attachments/assets/230576cf-d945-42…
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**Have you checked the [list of proposed rules](https://github.com/Benjamin-Lee/deep-rules/issues?q=is%3Aissue+is%3Aopen+label%3Arule) to see if the rule has already been proposed?**
- [X] Yes
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https://doi.org/10.1021/acs.jcim.8b00670
> Predicting the outcome of biological assays based on high-throughput imaging data is a highly promising task in drug discovery since it can tremendously i…
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As mentioned in #21, we will be having a short one-day meeting on this competition, partly in order to see what went wrong/right, and partly to discuss this area of science in more depth.
This Issu…
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Hi all. I hope everyone's well. An update on the paper (this issue closes #26).
The current draft is [here](https://github.com/OpenSourceMalaria/Series4_PredictiveModel/blob/master/Paper%20Submissi…
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I received a small grant to support experimental, biochemical testing of potential targets for Series 3 (#549) through partnerships with the wonderful core labs (NMR, mass spectrometry, X-ray crystall…
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Could you please check, why I'm getting not valid results (activity predictions) after fine-tuning the meta model: `actfound`.
This is the code I've written separately for finetuning and inferencing…
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In https://github.com/biothings/biothings_explorer/issues/792, knowledge_level / agent_type (KL/AT) info was added to all x-bte operations for Service-Provider-only KPs. There were multiple cases wher…
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We discussed this manuscript https://openreview.net/forum?id=S1gBgnR9Y7
Their setting is to use 1/3 of the images in the Cell Painting dataset that area also present in CHEMBL to predict 209 CHEMBL…