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### Description
Trying to train Transformer model, After following the instructions, I ran the training command, and the training stuck at the beginning at "saving checkpoint" phase:
INFO:tensorf…
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您好，我在eval text-to-text ST模型在wmt15 de-en数据上的性能时，看到原文中提到了latency的评估方式是在subword-level的，
> latency is measured with the subwordlevel latency metric.
但是在simuleval中貌似支持的是以word粒度为输入，以word或者char的粒度输出来评估…
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### Description
I have trained a `text_cnn` model on a custom `Text2Class` problem without any issues using `t2t-trainer` (I've also continued training with `t2t-trainer` by restoring from a checkp…
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I have trained a base transformer model using the sub-word segmentation approach of Sennrich et al. (https://github.com/rsennrich/subword-nmt). This requires me to set the subword_tokenizer in the new…
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Hi Xiao；
Thanks for this great tool！
I wonder if _paraphase_ could support T2T-CHM13 as reference genome. I've tried to set` -r /path/to/chm13.fa` but it seems not working well, is there any tec…
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### Description of feature
Add the HOSTILE tool for host decontamination
https://www.biorxiv.org/content/10.1101/2023.07.04.547735v1
https://github.com/bede/hostile
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Hello, now I have the result of EVM - gff3 file, I want to update my gff3 file to add UTR information, the following is my command：
```
singularity exec \
-B $PWD pasapipeline.v2.5.3.simg /usr/loc…
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[update]: oops, I just realized you can use `kallisto quant-tcc` to do this
I know there are workarounds for this but it would be nice to have a `--transcript-counts` option for `bustools count` th…
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Is this a TP or FP? It's looking a bit like an FP.
Event: chr1:120498098-120498633 536
chr1:120497597-120498097 chr1:120498633-120499133 535
chr1_MATERNAL:120552648-120553146 chr1_MATERNAL:14169…
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```
- when i put in my .t2t file :
[hydrogenAudio foobar2000 Wiki
http://wiki.hydrogenaudio.org/index.php?title=Foobar2000:Foobar2000#Specific_Gui
des]
- I see this as a href link :
http://wiki.hydro…