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Add Chapter(s) on cheminformations;
- Reticulate package for `rdkit`
- `webchem` package to get pubchem info etc.
- talk about chemical identifiers
- differences in databases
- making c…
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## Type: Bug Report
## URL: https://ui.transltr.io/main/results?l=Multiple%20Sclerosis&i=MONDO:0005301&t=0&q=7a9df8f8-b08d-483e-bcba-f01d2903579f
## ARS PK: 7a9df8f8-b08d-483e-bcba-f01d2903579f
## S…
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I am trying to use Fe2O3 in some of my thermodynamic calculations using 'thermo.chemical', but was unable to call it from the chemical database. I have used both methods shown below:
```
from thermo…
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@EvanDietzMorris reported that a large number of HMDB identifiers are missing from cliques. I'll add the full list here for later testing.
Full list of reported missing HMDB identifiers
```
H…
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This query asks what chemical entity interacts with a particular gene:
```
{"query_graph": {
"nodes": {
"$source": {
"cat…
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```
{
"title": "Aggregated Computational Toxicology Online Resource",
"notes": "This resource is a link to the ACToR (Aggregated Computational Toxicology Online Resource) website by EPA, where da…
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Being a Translator service, ICEES responses should be annotated with semantic data.
### Identifiers:
Where items like diseases and chemicals (including drugs) are concerned, ICEES should return id…
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Container issue for cookbook writing tasks/ideas around the Bayer/Maastricht University project:
- [x] [UCnn.x Registering a dataset in Wikidata](https://github.com/FAIRplus/the-fair-cookbook/issue…
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Query: What genes are downed by Ruxolitinib?
PK: ab417e9e-cac8-45c8-a114-4f4d4514c038
We get results for JAK1, JAK2, and JAK3, but also at least "Janus Kinase 1" and "Janus Kinase 2".
It look…
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There are a few failure modes:
1) the chemical is something without a structure... should probably bring in all the identifiers a la the mesh update and chebi
2) There is a inchi, but it isn't in un…