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Hi, I have a question regarding how hicBuildMatrix work:
I use this command to generate the contact matrix from several of my sequencing files. I want to know why some of my sample have very poor rat…
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**circularized chromosome conformation capture assay**
A nuclear ligation assay that captures interactions between one locus and all other genomic loci. 3C protocol is followed until a second ligatio…
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editor preferred term: genotype phasing by HiC
textual definition: An assay in which carbon-copy chromosome conformation is used to detect polymorphism in DNA samples
definition source for the textu…
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From @cmungall, via @mchibucos -
> I notice there is no connection between 3C-PCR
> http://purl.obolibrary.org/obo/ECO_0000236
>
> and PCR evidence http://purl.obolibrary.org/obo/ECO_0000082
…
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Below I attempt to compute something using an `h5py.Dataset`. To confirm that it isn't some other issue like data size, chunking, etc., I compute the same thing with a `numpy.ndarray`. In both cases, …
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This is an issue which arose through some matrix consistency checks.
https://github.com/geneontology/go-annotation/issues/1490#issuecomment-271813323
I'm assessing intersections of cohesin compl…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/ibn-salem/sevenC
Confirm the following by editing…
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A set of assay that ENCODE will be using
Reported by: vsmalladi
Original Ticket: [obi/obi-terms/726](https://sourceforge.net/p/obi/obi-terms/726)
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ChIP-3C (Chromosome Conformation Capture Assay)
see 22264791
lu-2012-7/9
Reported by: qweqwe6
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ChIP-3C (Chromosome Conformation Capture Assay)
see 22264791
lu-2012-7/9
Reported by: qweqwe6