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For replacing the Python OpenCOR API with LibOpenCOR, we need to be able to run the following commands:
```python
self.simulation = oc.open_simulation(cellml_path)
self.simulation.valid():
self.…
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From: https://github.com/hgrecco/numbakit-ode/issues/12#issuecomment-1099136091
The solver shouldn't recompile when only the initial conditions `y0` change. But this fact is hidden by the current A…
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### Description
When using GBODE with `noEquidistantTimeGrid` the logged stepSize is ignored and one GBODE step is done until the simulation end is reached.
1. In [perform_simulation.c.inc](http…
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The current ODE solver [odeint](http://docs.scipy.org/doc/scipy/reference/generated/scipy.integrate.odeint.html#scipy.integrate.odeint) is inflexible and suffers from problem of stiffness as explained…
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### What are you trying to do and how would you want to do it differently?
I would like to have a static solver.
### Is it something you currently cannot do? Is this related to an issue/problem?
Th…
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Hi Patrick
I am trying to calculate the first order sensitivity w.r.t. to all the three kinetic parameters for the Robertson Equations using `diffrax`. I am using the stiff ODE example provided [he…
sn248 updated
1 month ago
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### Your name
Haipeng Lin
### Your affiliation
Harvard Univ.
### Please provide a clear and concise description of your question or discussion topic.
## Background
During the development of GE…
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Hi! Since scipy.ode support features such as ```solout``` that odeint currently don't support,
if one want to setup a stopping criteria and therefore do some optimization with the system they setup,…
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Hi, awesome work! I had a question with regards to the distillation algorithm for TCD (Algorithm 1/2 in the paper, particularly w.r.t. Eq. 21). In the original LCM paper (to my understanding), the ski…
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MWE of preconditioned Newton-Krylov solves with OrdinaryDiffEq and Sundials:
```julia
using OrdinaryDiffEq, LinearSolve, Test
const N = 32
const xyd_brusselator = range(0,stop=1,length=N)
bru…