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### Description of feature
Nallo needs a repeat caller that is compatible with ONT data, even if it's not perfect, and we can't annotate the output with Stranger (yet).
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Hi, Thank you very much for devloping PECAT!
I am trying to assemble the Nanopore reads using PECAT, and got error during correction step as: `2024-11-20 03:36:52 [ERROR] Failed to convert line to ov…
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(Vote @rob-metalinkage @avillar @VladimirAlexiev @ar-chad @svilenvarbanov2019 )
We talked about
- [ ] `https://www.opengis.net/ont/citygml/3.0/rdf`
- [ ] `https://www.opengis.net/ont/citygml/3.0/o…
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Hi,
I am trying to assemble a phased genome of an outcrossing hexaploid grass species. The hybrid assembly failed with the error "hifiasm: gfa_ut.cpp:14200: uint32_t load_scaf_base(all_ul_t*, char*…
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Dear Developers
In the readme section, you mention that ONT models can be used with Clair3. I downloaded one of these model `dna_r10.4.1_e8.2_400bps_fast@v4.3.0` and gave it as input to Clair3. How…
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`chr20 40907241 Minda_87 N . PASS SVLEN=97;SVTYPE=DEL;SUPP_VEC=ONT_Sniffles2.DEL.20CM13,PB_ID_37586_2,PB_d_271,ONT_ID_26678_2,ONT_d_115,ILL_MantaDEL:252631:0:0:0:0:0,PB_severus_DEL4138,ONT_severus_DE…
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NU1103 Package stable Microsoft.Maui.Controls avec la version (>= 8.0.82) introuvable
- Version(s) 1 trouvée(s) dans Microsoft Visual Studio Offline Packages [version la plus proche : 9.0.0-rc.2.245…
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Hello,
I'm trying out Ribotin to assemble some tangles. They are probably not rRNA but I assume that it doesn't really matter. The morph size appears to be around 3 kbp.
```
ribotin-ref --appro…
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Currently, we dont recommend but write in the README also about manual conda/mamba installation of the dependnecies. Two things:
* 1) I think the conda commands can be merged into one such as (why …
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## Why
Lorsqu'un membre créé un salon et invite plusieurs personnes (déjà inscrites ou non sur Tchap), le risque est que les invités ne rejoignent pas le salon et que l'efficacité du salon ne soit pa…