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The @PavlidisLab/curation team compiled a list of single-cell experiments that need special treatment on import. We can convert those into test cases.
## Bulk/single-cell mix
Contains a mixture …
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Hello
I would like to ask if BLAZE can work with other type of single cell data such as split-seq technology.
These barcodes are a bit different than the 10X ones, since this technology uses 3 diff…
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Hi,
I'm following the single-cell analysis tutorial using your sample data or our Xenium data. However, I'm encountering an issue with the Calculate_Kernel step in the Celina package. When I set a…
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Dear Authors,
I hope this email finds you well. I would like to express my sincere gratitude to your team for developing the tool that has been of great assistance to me.
Currently, I'm facing an is…
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Hello, thank you for your brilliant work and sorry for a lame question:
Is it expected that the embedding for the same cell is different based on what other cells it is being embedded with? If so, …
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https://data.humancellatlas.org/analyze/portals/single-cell-expression-atlas
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### Version
0.46
### On which OS did this happen?
Linux
### Reproduction Steps
Read in CVA6 via the [yosys-slang](https://github.com/povik/yosys-slang) plugin and try to write it out again into a…
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Hi!
Amazing effort to also make a single-cell/spatial variant of Bambu, really excited about this and looking forward to testing it.
I was wondering what the status of this is, is it already mat…
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# What are the steps to reproduce this issue?
Read a dataset which contains an UnstructuredGridRepresentation item with a single value Cell Parent Window attribute.
# What does happen?
The method…
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Hi,
We'd like to request a batch of new terms as part of the CFDE project for SenNet and HubMap DCCs.
Attached is a file of the terms.
There is still work to be done on axiomization and a few o…