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### Bug report
I'm seeing multiple issues with binary operations in a loop.
Please let me know if you prefer I open separate issues for each one.
### Issue 1-A
When a loop does multiple unsa…
jrfnl updated
2 months ago
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I am trying to find malignant cells within all epithelial cells in a tumor tissue. I found [a paper ](https://aacrjournals.org/cancerres/article/81/11/3036/673612/A-TNFR2-hnRNPK-Axis-Promotes-Primary-…
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**Is your feature request related to a problem? Please describe.**
As mentioned in #345 and #566, there could be maps. This feature would be considered to be added when the same requirements to book …
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In our analysis of copy number variation, we currently use a manually curated set of regions for which copy number variant analysis tends to be inaccurate, but this list is not tied to a clear publi…
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I've been rereading the docs as I switch over to `variant@dev`, and have a suggestion in reference to ["That type annotation"](https://paarthenon.github.io/variant/docs/next/articles/that-type)
###…
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I have a situation where I am getting different ATE estimates with same input dataset and same random seed. If I run today the average ATE number is around 1. If I run after few hours, it increases to…
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Hi there,
since GDC release 23 there is a new readout for TCGA, 'Allele-specific Copy Number Segment'. It would be great if it were downloadable in TCGAbiolinks via:
```R
query.cnv = TCGAbiolin…
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From may to august 2024 I worked on late fusion of copy number variation (CNV) and histopathology microscopy images (H) data to predict cancer in patients with Barrett's oesophagus (BE). Killcoyne et …
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"Move the currently focused window to the n-th space" (throw-space-< screen-number > ) works for me configured through the GUI, but not when loaded from the ~/.amethyst.yml file.
It's likely that I…
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How do I explain the decision of a neural net trained with multimodal inputs (e.g., a multimodal autoencoder-based classifier trained on different types of genomics data such as gene expression, DNA m…