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The BioGRID distributes CRISPR ~2k screen data under [MIT license](https://biogrid-downloads.nyc3.digitaloceanspaces.com/LICENSE.txt). As of 2023.04.02, the most recent available release is 1.1.13, wh…
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https://mp.weixin.qq.com/s/ZYkZFwYLU64ErUnY_Vp2hQ
ixxmu updated
11 months ago
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When running the example from the Demo folder with iPython, I keep getting this error trying to create the plots interactively
```
In [1]: run screen_analysis.py
In [2]: data = loadData("Demo/Ste…
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Thanks again for the tool! We're using it in possibly a slightly different way than originally intended; our experiment probes many targets over a small region and is only interested in 2 or 3 genes. …
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Hi! I was pointed towards here through the ENCODE preprint ["Multi-center integrated analysis of non-coding CRISPR screens"](https://www.biorxiv.org/content/10.1101/2022.12.21.520137v1.supplementary-m…
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Hi,
I am wondering if MAUDE is designed for seeing the impact of guide RNAs on ONE target gene or if it also applies for whole genome FACS screening. In the tutorial it is all about one gene.
Fo…
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Hello! I am running into an error when running a calibration check in the low MOI. It looks like this:
```r
Running setup. ✓
Constructing negative control pairs. ✓
Generating permutation resam…
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# Background
A piece of information missing from the target page is whether the target can be catalogued as a *core essential* gene. These genes are unlikely to tolerate an inhibition and are there…
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For the [datasets in the DDE](https://data-staging.niaid.nih.gov/portal/wip/?from=1&filters=includedInDataCatalog.name%3A%28%22Data+Discovery+Engine%22%29&q=), I get different answers than what's in t…
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Copied below from the other issues here
- [x] Feb 28 Tutorials are in the GTN
- [x] Feb 28: [Record a video](https://gallantries.github.io/video-library/events/smorgasbord2/recording.html) following…