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(CC @ymen. Thanks to @timjph for initially bringing this to my attention).
The new translation code is sometimes generating incorrect (or at least improbable) translations in cases where gene annota…
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Hi @cmdcolin and @nathandunn ,
I added to
```
jbrowse {
git {
url= "https://github.com/GMOD/jbrowse"
tag = "1.16.3-release"
branch = "dev"
alwaysPull = fal…
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Hello,
I have been trying to visualize some tomato data using MoMI-G. I have been successful loading and visualizing all my files (xg and pcf) except for the annotation file. So basically, the circ…
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support loading psl and/or bed12 tracks
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In `kent/src/lib/cirTree.c`, in the function `rWriteLeaves`, in this section:
```C
/* Write out elements of this node. */
struct rTree *el;
for (el = tree->children; el != NULL; el =…
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This JSFiddle illustrates the problem :
https://jsfiddle.net/maxl/srx4qecL/4/
In the chrome debug/network console, I see a few successful http requests to the bigbed, and eventually there …
max-l updated
7 years ago
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Suggestions:
- [ ] It mainly could use some default displayed tracks (by adding some "visibility pack" lines).
- [ ] Some track description pages when they are ready (by adding "html path/to/page.h…
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I'd like to use pyBigWig to collect values at many intervals from many bigwigs, and I'd love to know what's performant.
1. is there overhead to opening a bigwig with pyBigWig? i.e. what's the runt…
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There appears to be some debugging/testing code left in [Shiny\.addCustomMessageHandler\("fubar",](https://github.com/paul-shannon/igvShiny/blob/96d73672be10356e5dacc9a3df4b6be51fd69032/inst/htmlwidge…
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**I just downloaded the docker image of the browser. It runs well, but can't load in genome annotations.**
**Here is how it looks:**
**Here is apache log I got:**
> root@9010c885452b:~# more…