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### Basic information
* My operating system: macOS Mojave 10.14.6
* My MZmine version: MzMine 3.0.11-beta
### What happened
* Raw data import -> Bruker TDF
* Selected a .d folder containin…
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- Describe the issue or question:
java.lang.OutOfMemoryError: Java heap space
java.lang.OutOfMemoryError: Java heap space
Failed in checking D:\FragpipeTest_HCT116\23092021_Fusion_Gautam_NT1.raw. W…
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Hi,
I am analyzing a sample that has been digested with 5 different proteases, i.e. Trypsin, LysC, AspN, GluC and Chymotrypsin. I am planning to analyze these data with MSFragger and finally end up…
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Hi, I tried running one DIA raw file with DIA_DIA-Umpire_SpecLib_Quant and got the error below.
I processed the file with Spectronaut and it completed fine.
Thanks,
Yishai
Info: 31 redundant …
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Hi,
currently the `timsTOF Pro` is a singleton below `Bruker Daltonics instrument model`
https://www.ebi.ac.uk/ols/ontologies/ms/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FMS_1000122&viewMo…
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- Describe the issue or question:
Hi, I am converting the Thermo raw files to mzml format using the instructions provided on Fragpipe website using MSConvert. when I upload the mzml files generated, …
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Just trying to create a checklist like @Jspaezp did. Please bear with me, I will delete this if it doesn't go to plan!
[Issue #2694](https://github.com/openjournals/joss-reviews/issues/2694)
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**Describe the bug**
(Not sure, wether this is a bug, feature request, misunderstanding or curiosity)
How is the link of added annotation building blocks (header names) to the respective ontology …