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For multiple genomic data, most of the information can be stored as matrices. The most striking example is with SNP data, which can be stored as matrices with thousands to hundreds of thousands of row…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/molsysbio/RUCova
Confirm the following by editing…
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Hi @andreas-h,
I am developing an open-source biomedical (genomic) data analysis tool, and I need pyloess for fitting data and calculating standard errors. Now I have to install pyloess in python2 …
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[InStrain enables population genomic analysis from metagenomic data and rigorous detection of identical microbial strains](https://www.biorxiv.org/content/10.1101/2020.01.22.915579v1)
Coexisting mi…
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Dear Dev,
I am new user of TRUST4 on single cell TCR seq analysis, regardless, TCR seq could be successfully obtained using bulk RNAseq data.
I wonder, with my 3' 10x genomics GEX data (I have b…
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Hello,
I have downloaded the scRNA-seq data from the articles for analysis. Some articles only provided TPM data (The TPM data obtained by RSEM is performed on smart-seq2 data), while others only p…
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Dear Developers,
We are trying to perform a BUSCO analysis in our assembly on a CentOS7 computer. While the Quast analysis is running successfully, we get 100% missing BUSCOs, even if we try the as…
ghost updated
4 years ago
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### Operating System
Windows 10
### Other Linux
_No response_
### Workflow Version
v1.2.1
### Workflow Execution
EPI2ME Desktop (Local)
### Other workflow execution
_No resp…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/Gionmattia/terapadog
Confirm the following by edi…
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The new version of RStudio includes an Terminal interface. I think doing genomics data analysis people use a lot of bashscripts and often want to go back and forth to raw fastq read files (i.e. do a l…