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@MichaelaEBI commented on [Tue Mar 06 2018](https://github.com/opentargets/data_release/issues/71)
@ckongEbi commented on [Tue Jan 23 2018](https://github.com/opentargets/data_pipeline/issues/243)
T…
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Hello,
this is a question on PMIx v3.0.
In section 11.1.9 PMIx_server_setup_application in line 14 on page 243 I read
> The returned data must be distributed by the RM and subsequently delivere…
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Hi,
I am just curious whether there is a limit of the nodes that can be analysed in CNoptR? If there is, what rough number is it?
Thank you
Weijun
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This is testing within Debian.
3.1.0rc1 works fine; 3.1.0rc2 fails on 32-bit archs.
See https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=918157
This is with openmpi 3.1.3. This will not com…
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Dear Denes,
following your documentation on http://pypath.omnipathdb.org/index.html#example-3-pathways-annotations my code crashes again in example 4:
```
notch = pa.pathway_members('Notch', 's…
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*Original issue: https://charm.cs.illinois.edu/redmine/issues/1076*
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Long MPI run on 9 nodes of PSC Bridges failed to exit, hung until job was killed. Note the lack of "[Partition 0][Node 0] End …
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Hi,
I installed the latest pypath version (0.7.93) via pip install git+git://github.com/saezlab/pypath.git
My python version is Python 2.7.5 (default, Nov 20 2015, 02:00:19)
[GCC 4.8.5 20150623 (…
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Hi
I installed the latest pypath version within a new conda environment on a Ubuntu 18.04 machine:
```
# Name Version Build Channel
asn1crypto …
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Hello,
I am new to OmniPath. After installation, I tried to extract a network using the sample code provided on OmniPath website.
import pypath
pa = pypath.PyPath()
pa.load_resources({'signor…
bimwu updated
6 years ago
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## Background information
- I tried to install new ompi for distributed computation.
- I downloaded fresh, stable release (v3.1.3) from open-mpi.org (because a release one from here does not have co…