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## Expected Behavior
An output.csv table with a list of each interaction
## Current Behavior
outup.csv table with neither names of proteins or pTM/ipTM scores
## Steps to Reproduce (for bugs)
in…
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[Improved prediction of protein-protein interactions using AlphaFold2, Nature Communication 2022](https://www.nature.com/articles/s41467-022-28865-w)
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## Expected Behavior
AlphaFold2_complexes
## Current Behavior
AlphaFold2_complexes failed
TypeError: cannot unpack non-iterable Msa object
Help！！！Thank you very much！！！
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Hi, I'm training openfold with single node multi GPUs and multi nodes multi GPUs. I find something interesting.
In the `environment.yml` file the deepspeed version is `deepspeed==0.5.3`. But the z…
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For context: I installed Conda Colab and the install dependencies part correctly.
…
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The Environment:
================
Running on Docker 20.10.12-3 on RHEL 7.9 with 4x NVIDIA Corporation GV100GL [Tesla V100 PCIe 32GB] cards.
CUDA version on this host is 11.4.
I also get this v…
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alphafold2_pytorch-0.4.15
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https://github.com/lucidrains/alphafold2/blob/b7ac2122fc79ff4da52a146e076da518e1357603/train_end2end.py#L71
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Can I run alphafold2 without any structure template information? when I download the pdb_mmcif dataset, it is too slow, so I want to test af2 without any structure template in my local machine. How to…
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Hello.
I recently installed the newest version of localcolabfold (v1.5.5) on a server with 152 CPU cores and 4 NVIDIA gpus. Installation was carried out following localcolabfold installation scrip…