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Add three types of basic Manhattan plot
* Circular for a square Manhattan plot (single column paper) with circus plot in R
* _Regular_ Manhattan plot using ggplot2 with colour/BW options
* _Zoom…
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like this
![image](https://github.com/YinLiLin/CMplot/assets/26478793/28729938-343f-4f0a-95ed-454ffa28abbd)
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Hi!
Thanks for this R package, I think it's precious and very useful.
I have been looking for a way to show **SNP names or gene names** of significant points (out of the diagonal line or consideri…
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## `README.md` with commands and analyses
**2/2**
| Exercise | Points Possible | Grade |
| -------- | ------- | ------- |
| Commands for Step 1.1 | 0.33 | 0.33 |
| Commands for Step 2.1 | 0.3…
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## `README.md` with commands and analyses
**1/2**
| Exercise | Points Possible | Grade |
| -------- | ------- | ------- |
| Commands for Step 1.1 | 0.33 | 0.33 |
| Commands for Step 2.1 | 0.3…
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## `README.md` with commands and analyses
**1.67/2**
| Exercise | Points Possible | Grade |
| -------- | ------- | ------- |
| Commands for Step 1.1 | 0.33 | 0.33 |
| Commands for Step 2.1 | …
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Hi @suvakov
I sent the log file to your email.
Below is the Manhattan plot of the two samples.
Does this Manhattan plot have anything to do with the warning message?
warning mes…
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Thank you for the very useful function.
I was wondering if it would be possible to add different cut-offs lines for each trait in a circular Manhattan plot. I am actually using the CMplot function …
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## `README.md` with commands and analyses
**2/2**
| Exercise | Points Possible | Grade |
| -------- | ------- | ------- |
| Commands for Step 1.1 | 0.33 | 0.33 |
| Commands for Step 2.1 | 0.3…
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Hi,
Not really an Issue. I was wondering if you have at hand a solution to articulate Manhattan plot data on pyGenomeTracks
Thanks
diego