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### Summary
Getting following error
============================================================ short test summary info =============================================================
FAILED nipype…
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@chrisfilo @effigies @oesteban @djarecka @yarikoptic @miykael @tsalo @tyarkoni @ccraddock
Potential times
1. Oct 2018 in ??? (happy to host in boston, but welcome other suggestions, joint ventu…
satra updated
6 years ago
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Hello, when running ASLPREP, I get this error message. Please help me debug it. I have ASLPREP version: v0.6.0 and Freesurfer version: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a and I'm…
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Hi Matt and colleagues,
I am currently trying to concatenate qsiprep preprocessing, and three reconstruction workflows (mrtrix_multishell_msmt_ACT-hsvs, mrtrix_multishell_msmt_pyafq_tractometry, am…
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### Describe the bug
I have different subjects, but they are in BIDS Folder format with the same number of files and the same description. I also use the same Data Config (BIDS default setting) and p…
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## Summary
AFQ reconstruction (`pyafq_tractometry`) outputs some errors and doesn't stop there, although it seems stuck in the next step for a long time (still "running" after 30+min | UPDATE: I kill…
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Previously ran into this error with this dataset https://github.com/poldracklab/tacc-openneuro/issues/61. Reran a sample of 4 subs with 23.0.2. No longer getting that error but 2/4 subjects failed wit…
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As discussed in https://github.com/miykael/nipype_tutorial/pull/35 with @djarecka and @satra, the goal is to move the user documentation from Nipype's main homepage to nipype_tutorial.
As a first s…
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### Title
The evolution of Nipype into Pydra
### Leaders
Tom Close (GH+MM: @tclose) and Arkiev D'Souza (GH: @arkiev MM: adsouza)
### Collaborators
Dorota Jarecka (GH: @djarecka MM: dor…
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```
~/proj/nuisance/data/dbic-deid$ singularity run --cleanenv envs/bidsonym_latest.sif sourcedata participant --participant_label=sid000003 --deid pydeface
Making sure the input data is BIDS compl…