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Thank you so much for making such a powerful tool. We are trying to solve some practical problem with this.
We have two batches of samples, pre and post-treatment, each containing 3 samples. Both …
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Hello! Thank you so much for this package. I would like to run svds using the BPCells wrapper function on a matrix containing 9,096 genes and 4,188,533 cells. I followed the workflow outlined in the v…
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### **Data Cleaning and Exploration:**
**Dropping Rows (23, 24, 26, 27):** It would be helpful to understand the rationale behind dropping these specific rows before Exploratory Data Analysis (EDA)…
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Firstly, thank you for putting together such a useful tool!
Apologies in advance if this is a naive issue as I am relatively new to R and scRNAseq analysis. I am trying to use Lamian to compare pse…
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Creating different files representing specific functional categories to store the functions will make them more accessible. I propose this be done by both analytical purpose aswell as the nature of th…
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**Please provide some background on the proposed additions or changes.**
In tackling the refactor of the GOI template notebook, we needed to adjust the point sizes in the sina, UMAP and PCA plots. …
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hello
i had use _"adegent"_ finished my analysis and it works good
however,when i want to export my results figures in _pdf_,i find that the legend of the picture is disappear
the fact is that :wh…
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## **BLOQUE 1:** Comparación de yacimientos:
- descripción del conjunto de datos
- definición de aproximaciones y metodología
- descripción entre yacimientos
1.1 Composición esquelética
1.2 Ag…
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I'd like to open an issue to map out ideas about the general workflow for the analysis. Please edit or comment if you have suggestions. A general goal is to move away from using Seurat, if possible, a…