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Hi,
I'm attempting to download some scRNAseq files from SRA, and convert them to fastq.gz format to use as input to CellRanger.
I am using sratoolkit v2.10.8.
This is an example of one of the f…
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Hello. I've been working my way through this very thorough and professionally presented tutorial, and have into a problem.
When attempting to call `./run.sh neworder`, I get a Bad Request error. He…
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Hi, I am trying to map multiple files using the following code in a loop in jupyter lab. However, I am seeing only one single set of output files rather than one for each sample.
!STAR --genomeLoad…
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### Describe the bug
Despite the successful start of the data collection process, no JSON files are created, and not a single job is applied, even though the score is being matched at 4.
### Steps t…
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Intended to allow the ghostscript syntax -o myfile%d.jpg .
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When removing files from the output (one or many), the files in s3 do not mirror the removal leaving in s3 a lot of files that shall be removed. Sometimes we do not notice this because all files are g…
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**What happened?**
First, the preconditions:
* I created a sample OpenAPI document with a single operation, no `operationId` defined
* Using a `redocly.yaml` configured with no plugins / custom lint …
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When I ran the example files, everything worked fine. However, when I used my own data for cis-QTL mapping with permutations, I received numerous warnings, such as:
processing phenotype 3846/15661 …
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**Describe the bug**
When exporting app with static rendering, html files have an empty body content in dist folder
**To Reproduce**
Steps to reproduce the behavior:
1. Clone the base project ac…
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I would like to disambiguate two potential meanings of "parallel writing" with MPI. Here is an example scenario. Can you let me know which behavior to expect from h5py + MPI?
Scenario: A pre-existi…