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hello, I'm running through the tutorial of Using pycisTopic on human cerebellum single-cell multiome data
I successfully ran the commands until:
cell_topic_heatmap(
cistopic_obj,
variables…
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Hello. I have file-indexing error every startup and want to fix it. I saw old thread about exluding folders from indexing and it is not my solution. The project I am working in contains 67 000 files a…
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New files yet to be committed (or gitignored) are likely to be relevant to the current task at hand. It would make sense that these files be eligible for indexing.
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## Bug Report
I'm opening this report here instead of the "extras" package because I think it's not package specific, but generic shim behaviour.
#### Current Behavior
When calling the executab…
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![QQ20241104-105712](https://github.com/user-attachments/assets/1ff8f42a-ddd3-4d00-b8c2-c97ef4be8770)
Hello, I followed the readme document and found that a missing file error occurred when building …
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Hello,
I encountered the following error during the execution of my circular RNA analysis pipeline:
```bash
Indexing .bam file...
open: No such file or directory
[bam_index_build2] fail to op…
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**Issue by [Vittly](https://github.com/Vittly)**
_Wednesday Nov 18, 2015 at 07:01 GMT_
_Originally opened as https://github.com/adobe/brackets/issues/11926_
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Hello. I have file-indexing error e…
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We need some clear instructions on how QGIS files and layers work. It would be good to have some basic diagram of how files related to projects are organised and listed in the same folder and relative…
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### Current behavior 😯
It seems that Azure Devops (at least over SSH) has some form of pagination when reading packs. Given the code below, fetching a trivial repo (one file, one commit) will work …
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### Issue
I have a project located in a directory: `/path/to/directory/old_name`. I renamed the project to `/path/to/directory/new_name`.
Then when I try to use aider, it simply is frozen:
```
…