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Afuma, can you upload also the nrrd files with the segmentations that you are manually adjusting, as well as the T1 MRI image?
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Once segmented the MRI, get the segmentation for the original image from supervoxels
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- MRI Brains Segmentation
- Geospatial Stunting
- CT scan optimization
- AWS Twitter Bot
- Child DIASS paper (maybe)
- IAIA (project ongoing)
- EEW (project ongoing)
- Capstone (project not beg…
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Implement visualization tools to aid debugging and algorithm development. For a first pass leverage `hdav` to visualize 3d volumes such as:
- Rasterized Mesh
- MRI voxels
- Segmentation labels
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Hi Raidionics Team
I've been working a time ago with many of the Colab notebooks added in "processing backend for performing segmentation and computation of standardized report (RADS)" and it has bee…
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# Macapype: An open multi-software framework for non-human primate anatomical MRI processing
***By David Meunier, Institut de Neurosciences de la Timone (INT), Aix-Marseille Université, CNRS, Marseil…
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Hi Ivan,
I trained the model using simulated data.
Now during inference I gave only (binary segmentation of T1gd and Flair), and the model can estimate the parameter.
But I am having trouble for pa…
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### Description
Design a Arcana analysis class that implements structural MRI preprocessing and analysis to be used stand-alone or as inputs to other pipelines (i.e dMRI, fMRI, etc.)
### Benefit H…
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Hi Miguel!
You wrote in the readme that you found that your crf-rnn didn't make any difference when applied to MRI and CRT scans. Have you benchmarked your layer on 2d image segmentation models? D…