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As someone who had previously used Nextflow extensively on HPC and was learning cloud (AWS) for the first time, figuring out how to get Nextflow running with AWS proved to be really difficult and conf…
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What's the benefit of using of disabling exception throwing on validation error and checking explicitly for validation errors, like here?
https://github.com/seqeralabs/nf-tower/blob/1df76e647e004ef…
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Seqera Platform HPA scaling policy relies on Prometheus metrics to scale pods on-demand depending the number of http requests. See here
```
- type: Pods
pods:
metric:
name…
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We want to make sure we are able to build Wave Containers with target micro-architectures that are relevant/useful to the service.
Current status:
- Nextflow is capable of feeding fine grained CPU…
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I'll migrate this over once we create the repo...
```[tasklist]
### Roll out a few specific repos first
- [ ] Tools
- [x] https://github.com/nf-core/website/pull/2236
- [ ] Modules
- [ ] Pipel…
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I'm a bit confused by the use of `Thread.currentThread().interrupt()` followed by an exception throw in the following snippet:
https://github.com/albertfc/csv/blob/dc4f4908744341622c0cb2e4b4272b45…
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@emmastrand @journeymansix here is data from Roberto's paper (Heat resilience in oysters paper). There is a gene counts and transcript counts matrix that we can compare our gene counts to. One issue w…
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Thanks for creating this project. I was looking at the executor shutdown and I was wondering why it was used `shutdownNow` instead of `shutdown`. Is there a specific reason?
https://github.com/a…
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### Description of the bug
From terminal output (see below) I see that nextflow tries unsuccessfully to run this:
`singularity pull --name nf-core-bedtools_coreutils-a623c13f66d5262b.img.pulling.1…
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Hello!
Is there any interest in nf-core-izing this pipeline to add e.g. params.json so the pipeline can be submitted from a GUI interface with `nf-core launch` or through Seqera Nextflow Tower?
Warm…