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### Description of feature
i am attempting to install a subworkflow from a custom repository, but i am having issues installing the missing modules from the nf-core/modules repo:
```
$ nf-core subw…
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**Problem**
I currently have several snakemake workflows that require different environments on a per-rule basis when running within a docker container. I want the creation of the docker container to…
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050のシェルスクリプトについてわからないことがあったので、質問させてください。
まず、{rg}で用いられているRead Groupの値というのは、どこに書かれているのでしょうか。
もう一点、samtoolsで使われている「-1」、「-」というオプションの意味についてもご教授いただければと思います。
よろしくお願いいたします。
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Thank you for such a fantastic tool.
I have been trying to get RAT to work. Your documentation specifies "Currently, RAT supports single read files as well as paired-end read files. Interlaced read…
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- [x] cutadapt (v.1.18) --> `/cwl/tools/cutadapt/cutadapt-v.0.7.17.cwl`
- [ ] bwa-mem (v.0.7.17) --> `/cwl/tools/bwa-mem/bwa-mem-v.0.7.17.cwl`
- [ ] Sambamba (v.0.6.8 ) --> `/cwl/tools/Sambamba/Samb…
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Hi,
Thank you for developing the wonderful TEPID tool.
I have learned that the tepid-discover using concordant, disconcordant and split-reads bam as inputs. I was wondering if it is possible tha…
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So - I'm trying to generate SV frequencies from long read data (ONT) aligned with a split-read aligner (BWA MEM) using SVtyper, but I keep getting an error:
Error:
Traceback (most recent call last):
…
timp0 updated
4 years ago
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Hi ！
do you meeting this kind of error before?
this is the main program error:
Traceback (most recent call last):
File "/home/projects/ku_00041/apps/wanli/v1.4.1-plaspline/Plaspline/conda_en…
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### Description of feature
Hi,
Illumina has introduced a new read compression format, ORA: https://www.illumina.com/science/genomics-research/articles/design-ora-lossless-genomic-compression.htm…
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# Key specs for the MVP1
- [x] Have as many species as possible listed in https://brc-analytics.org/data/organisms
- [ ] Have all species from above registered as Galaxy Reference data with corre…