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I'm interested in very basic document clustering. Is there a plan to include document clustering in quanteda - or is this considered outside the scope of the (so excellent) package?
I ask in part bec…
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Hi Rebecca,
Thanks for the handy package!
Would it be a good idea to allow a distance matrix input?
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* Enhancement:
1. ANOVA --> using more than one dependent variable
2. Possibility to sort frequency (or any other) output table
3. Enhance Lin. regression by All possible regressions feature (t…
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Hi,
When I use Rscript I met a problem:
```
$Rscript ./bin/clustering_chrs.R distictive_kmer_and_counts cluster_center.pdf dendrogram.pdf
Loading required package: ggplot2
Welcome! Want to lear…
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Hello,
I am attempting to create a dendrogram from previously run data. I have generated a Condensed Tree and converted it to a dataframe using `to_pandas()` method. I saved that data as a .csv file…
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Hi all,
I made a heatmap using complex heatmap and it is clustered by rows and column. There being several row names the heatmap is dense and I wish to only keep say 10 rownames from top and 10 from…
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Hi - thanks for the cool software!
I'm hoping this is just user error, but I can't seem to display my tree:
```
In [18]: dclust.showdendro()
----------------------------------------------------------…
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I have downloaded rapids19 to i can use AgglomerativeClustering. Traditionally i would pass a distance matrix and a dendogram would be computed. It is not clear to me though how i can use this functio…
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I was hoping to use genieclust gclust() package as the method for clustering at rows and columns. This is a Robust Hierarchical Clustering with Noise Point Detection.
However, when I use it as the cl…
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This is a new feature. Seems bioinformatics folks need this.