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https://bioentity.link//#/publication/10.1093/genetics/iyae174
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In the CAM-KP 2023-04-20 release, we've got a large number of nodes that could not be normalized:
```
1 BFO
1 EMAP
1 EMPA
1 MA
1 PRO
1 RGD
1 WBPheno…
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Dear all,
The proposal has been made to obsolete
'organic substance biosynthetic process' GO:1901576
'organic substance catabolic process' GO:1901575
'organic substance metabolic process' GO:00…
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Dear all,
The proposal has been made to obsolete
GO:0006487 protein N-linked glycosylation
see https://github.com/geneontology/go-ontology/issues/28538
Experimental annotations that need to …
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Once the tRNA (SO:0000253) revisions have been addressed (#583), they should be mirrored under tRNA_gene (SO:0001272).
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@jcolomb so we can connect to the flybase database now, thanks for kicking this off!
But, now we should decide what fxns to make and export to users.
Users can just connect to the SQL database…
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Hi,
Histone modification BPs will be moved to MFs in the BP refactoring project.
Annotations are here:
https://docs.google.com/spreadsheets/d/1LJTu3sZjwH7u3sD65KXf_e-l3A85cRKpeiYh2DVsRgg/edi…
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Hello,
I am using the function compareCluster for three different lists of genes (Drosophila melanogaster; flybase Fbgn). When I have the results I observe that not all the genes are used for the e…
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Requirements:
- Python 3 (chosen for better UTF-8 handling)
- Python requests (can be installed via pip)
Scripts ready to run:
neo2neo/add_constraints_and_redundant_labels.py
neo2neo/make_named_ed…
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https://bioentity.link//#/publication/10.1093/g3journal/jkae210