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Thanks of the great tool!
Regarding the prevalence method, do I get it right that it only considers the presence/absence of an ASV (etc) in samples and controls (rather than prevalences within eac…
mniku updated
5 years ago
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Hi @benjjneb,
Thanks for your efforts developping dada2 which contributed to revolutionise the analysis of 16S data.
We are working on the dynamic of fecal microbiota using in vitro systems and …
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Currently, if the parent revision for an imported revision is missing from the replica database — either because it was deleted, or because of data loss — then the character count for the imported rev…
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Faith, J. J.
McNulty, N. P.
Rey, F. E.
Gordon, J. I.
2011
Predicting a human gut microbiota's response to diet in gnotobiotic mice
http://dx.doi.org/10.1126/science.1206025
The interrelationships bet…
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https://bioentity.link//#/publication/10.1534/g3.120.401309
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The following functions have multiple rows in the custom function hierarchy table.
Hi! My name is Ilse I want to run Burrito with these data, but it did not work, actually I already check all my f…
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How can I downloaded the Primers_CRegion.fasta file and Primers_VRegion.fasta?
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Lozupone, C.
Faust, K.
Raes, J.
Faith, J. J.
Frank, D. N.
Zaneveld, J.
Gordon, J. I.
Knight, R.
2012.
Identifying genomic and metabolic features that can underlie early successional and opportunistic …
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Hello everybody,
I have a small issue which is probably just a rookie mistake. I have a dataset of vaginal microbiota; Illumina HiSeq sequencing was performed, I have run the Dada2 pipeline, and m…
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Hi
When I ran sourcetracker_for_qiime.r with only one sink, an error occured:
Error in if (d2 == 0L) { : missing value where TRUE/FALSE needed
Calls: apply
Execution halted
My input files l…