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Hi,
From your paper, it said that you get the longest ORF using the gffread, but the output of stringtie does not have the CDS information. Could you please tell me how you get it?
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Any new feature requests.. can put them here.
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The `disallowBlankTranslations` option is global and useful to enable. However, some strings support an empty state and should be excluded. [This circumstance occurred recently for a string in MobileF…
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_(An earlier version of this post used `TypeAnnotation` rather than `TypeForm` as the initially proposed spelling for the concept described here)_
**Feature**
A new special form `TypeForm[T]` wh…
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We would like to add three evidence codes used at RGD for disease annotation to the evidence ontology as synonyms of existing codes:
1.
ECO:0000314 ‘direct assay evidence used in manual assertion’
RG…
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Hi, thanks for the work on this package. Its really nice to have the freezed functionality with a much simpler syntax.
I see the `ignoreNull` option, but one thing I didn't see in the docs is if i…
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Today, the Java client returns response rows (from pull/push queries) as Row/KsqlObject objects. Some users have expressed interest in being able to convert these response objects into POJOs based on …
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**Is your feature request related to a problem? Please describe.**
Saving a reasonably sized notebook (20 pages) takes several seconds and results in files that seem quite large. There was no discuss…
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A rule of the form
```
R = A R { a1; } / A { a2; }
```
should be rewritten by the optimizer as
```
R = A r:R? { if r then a1 else a2; }
```
because the second rule has a different complexity, as i…
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I'm curious as to what would be the best practice for this situation...
I have an np.array containing 18 expression values for gene y. There are 3 replicates, so 6 different conditions.
`adata.X[…