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This is a really smart tool. More mappers should include support for circular genomes. Several questions/suggestions:
1. In order to make this more universal, why not extend each sequence by 100% of …
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Loom: v0.5.43 Build(release # 43)
Loader: v0.11.1
When I have an accessWidener configured in my `build.gradle`:
```
loom {
accessWidener "src/main/resources/qol.accesswidener"
}
```
my b…
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Hello --
Thank you for developing and maintaining a powerful resource for the genomics community.
I've genotyped SVs for a species of bird, and noticed there was an aberrantly large inversion t…
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Hi,
First, I appreciate your wonderful tools for analyzing nanopore data. Recently, I have been trying to use **Dorado 0.7.0 v5.0.0 HAC** to call the base and modification from pod5 files, and I ma…
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Calling `ST_Read_Meta('my.shp')` against a vanilla shapefile; subsequent calls to `ST_Read_Meta()` for the same or different shapefiles regularly throw a type mismatch error:
`Mismatch Type Error: …
rcoup updated
3 weeks ago
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value conversions very good feature in EF Core but not convert spatial datatypes or binary to custom objects. for example, I just save Point as geography to database and want use own Point class for g…
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Hi Yoshiaki,
While I was trying to run the VIRTUS.PE.cwl, it throw an error "EXITING because of FATAL ERROR: could not create output file: /media/ozy/Seagate/virtus143/Log.out Check if the path /medi…
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Thank you for developing such an excellent tool. Since NextPolish was not tested in metagenomic data which has strain-level polymorphism(similar to haplotypes), I wondered if there were any problems w…
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The LArrayNative.mmap is not working for files > 4GB on windows 64 bit
I just spend way too many hours finding the problem crashing my jvm all of a sudden... So I want to document the problem here.…
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I was wondering how STAR development will continue with regard to the new GRCh38/hg38 assembly and the existence of ALT contigs ([Reference 1](https://www.biostars.org/p/59126/) [Reference 2](http://w…