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Thanks for your great work. I·m collecting the latest algorithms about learning to deblur. And could you tell me where did you get the algorithm for the program "Learning a Convolutional Neural Netw…
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Dear vsearch developers,
based on issue#305, I am trying to use vsearch for extracting consensus sequence from 50 reads 700bp long. When I try to align back the 50 reads provided as an input to vsear…
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hi,
I have done a little work follow your Deblur GAN work, but when I train your code which i get from github the result on the GoPRO dataset is not good. Just PSNR=26.02 and SSIM=0.88222. So can …
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Hi,
Indels aren't calculated correctly because `sub_seq_i` and `sub_seq_j` are identical.
deblurring.py
160 `sub_seq_i = seq_i.np_sequence[:length]`
161 `sub_seq_j = seq_i.np_sequence[:length]`
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Just spoke with @antgonza, and this method is fantastic especially for aligning with redbiom contexts. There are two additional fields that would be invaluable to have:
- `platform` so we can diffe…
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HyperDEX 0.1.0-alpha.1
Electron 2.0.0
darwin 17.4.0
Locale: en-US
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Hi Seungjun,
I am currently trying to train the network with a different dataset than the GoPRO to help deblur the images I am using. I'm having a problem in getting the code to recognise my dataset …
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See the discussion on the forum [here](https://forum.qiime2.org/t/deblur-problem-duplicate-sample-ids-error/1213/10). The sample IDs allowed by QIIME2 are not currently assured to be MIENS complaint. …
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I hope this is the right place to discuss how we want to integrate fragment-insertion AKA SEPP into Qiita.
I think we agree on the fact that we somehow want to cache placements of sequences into on…
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some fragment sequences contain lower case chars, which is a problem a) for downstream analysis with QIIME2 and b) fragments with same sequences but different combinations of upper/lower cases needs t…