-
```
What steps will reproduce the problem?
$ cat test_empty_seq_line.fa
>test1
>test2
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
>test3
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
…
-
```
What steps will reproduce the problem?
$ cat test_empty_seq_line.fa
>test1
>test2
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
>test3
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
…
-
```
What steps will reproduce the problem?
$ cat test_empty_seq_line.fa
>test1
>test2
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
>test3
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
…
-
```
What steps will reproduce the problem?
$ cat test_empty_seq_line.fa
>test1
>test2
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
>test3
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
…
-
**Are you using the latest release?**
Yes, version 1.8.16 as installed per https://funannotate.readthedocs.io/en/latest/install.html via conda.
**Describe the bug**
Funannotate train generates a …
-
Hi, I attempted to run NCycProfiler.PL as follows:
```
$ perl NCycProfiler.PL -d ~/data/ -m /usr/bin/usearch -f fq -s nucl -si sample_info.txt -o NCyc_output
No diamond/usearch/blast files were d…
-
I couldn't find an example for this in the docs, but are Interval values (not unknowns) allowed in the root function?
I tried the following (note the interval `g1` parameter), but it doesn't appear…
jebej updated
4 years ago
-
Hi there,
Fastp is great!
One thing I encounter is that some of the files doesn't have any reads if I use `--split`. Here is the command I used.
```
fastp -i A_1.fq -I A_2.fq --split 80 -o 1.fas…
-
Hello,
i would actually write this on https://github.com/ezsystems/ezplatform-solr-search-engine but unfortunately the issue board is turned off there and the creating the pull-request for that is …
-
I want to run `fastp` for quality control only. I ran
```
fastp -i MYFILE.fq.gz \
--disable_adapter_trimming \
--disable_quality_filtering \
--disable_length_filtering \
--disable_trim_pol…