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Stephen, qqman has been great help in making Manhattan plots of my results. I would like to add vertical lines for things like candidate genes and horizontal lines for a comparison with a QTL analysis…
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When streaming from iTunes to my custom device I always hear small cracks when shairport-sync does basic stuffing. I changed several parameters but nothing helped. The cracks are also audible when I c…
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The chrlabs option for more chromosomes than 23 does not seem to be supported, e.g. chrlabs=c(1:38) still plots only 1:23.
Also, logp=FALSE or logp=TRUE both still produce plots of log10P value, rat…
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Dear Stephen,
Thank you for developing the nice tool qqman. Could you please help to sort out some error when running the manhattan function? Many thanks!
I want to modify the settings on pch and y …
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I'm getting asked to speak at damn near every meetup in the world about `io.js` but I don't scale.
I'd like to put together a slide deck with good presenter notes for people to use at their local mee…
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Hi Stephen,
Is there any way to plot multiple SNP GWAS results for different traits into one manhattan plot? I was hoping to create one graphic with all manhattan plots with each trait having a dif…
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From a [blog comment](http://gettinggeneticsdone.blogspot.com/2014/05/qqman-r-package-for-qq-and-manhattan-plots-for-gwas-results.html?showComment=1413407941045#c6236934163250163065):
> I found the s…
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![rplot](https://cloud.githubusercontent.com/assets/7966457/3360290/2ba2d76a-faf1-11e3-9455-7f773cebfd4a.jpeg)
I am getting these strange Manhattan plots. I look at the hist of my pvalues they seem …
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I am currently using manhattan () function for my GWAS data and found two isuues with it.
(1) All chromosome number (i.e. 1.. 22) does not appear on x-axis though you make the font-size small with ce…
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Original [issue 2042](https://code.google.com/p/moviejukebox/issues/detail?id=2042) created by Omertron on 2011-07-20T15:44:46.000Z:
What steps will reproduce the problem?
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What is the expec…