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1. Open IFC in Renga
2. Open BCF for this IFC
3. Select View - Error
tyan updated
2 months ago
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It would be amazing if all of the file types specified here such as VCF v4.2 had a formally defined and [registered MIME type with the IANA](https://www.iana.org/form/media-types) for use in interchan…
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### Environment
- OS and Version:
NAME="Rocky Linux"
VERSION="8.7 (Green Obsidian)"
ID="rocky"
ID_LIKE="rhel centos fedora"
VERSION_ID="8.7"
PLATFORM_ID="platform:el8"
PRETTY_NAME="Rocky Li…
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Hi Mark Andre,
I tried installing Katcher on my Ubuntu computer and got the following errors after executing a make command. I completely lost what is missing. I have samtools 1.13 installed using …
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Here are some potential memory leaks detected with Cppcheck 1.66
~/htslib$ cppcheck --version
Cppcheck 1.66
```
~/htslib$ cppcheck --force . | grep error
[bgzf.c:69]: (error) Memory leak: new_flags
…
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I am attempting to run phase_common_static from the docker image loaded from shapeit5_v5.1.1.docker.tar.gz on the All of Us research platform. I was able to successfully run the program using the foll…
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Hi,
are these errors known? First seems to be a missing include path, second is that configure likely did not record path to site-wide htslib installation? I have gcc-4.9.4.
```
>>> Configuring…
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**Describe the bug**
Hi, I am just going through the simulation tutorial (https://kangchenghou.github.io/admix-kit/simulate-admix-genotype.html) and running into an error that seems to have to do wit…
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Trying to https://github.com/uio-bmi/two_step_graph_mapper#reproducing-the-results-from-the-manuscript-thorough-benchmarking-on-whole-genome-1000-genomes-graph but facing the following errror:
```
…
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MODO now supports remote streaming of CRAM files. The test dataset of the genome center is mainly BCF files, therefore we need to implement the same feature for variant files.
**Requirements:**
* [x]…