-
Issue reported by email from [Scott Brown](http://www.holtlab.ca/personnel.html#scottb):
>I have a question regarding the protein sequence output from Isovar. I have seen multiple cases where th…
-
Hi Alex,
I observed a phenonome when I run the new release function _Barcode and cDNA on the same mate_. You give us an example to set the readFilesIn. reads1 fastq is at the first palce and the re…
-
Hi! By running the following command:
nextflow run mop_preprocess.nf -with-docker -bg --fast5 " " --fastq files "/home/MOP2/mop_preprocess/fastq/ " --reference "Homo_sapiens.GRCh37.cdna.fa" --annot…
-
I can load my fasta and run the indexing function fine, but it simply produces nothing. The outpout looks like below in my terminal:
[build] loading fasta file Homo_sapiens.GRCh38.cdna.all.fa
[bui…
-
Hello,
Thank you for providing such a great tool!
For single exon gene/tx reconstructed by bambu, I was expecting them to be unstranded with the cDNA protocol (which is the case) but correctly s…
-
A lot of the times when we are assessing our samples before we move on to fragmenting cDNA in to fragments, we look at the distribution of full length cDNA using a Bioanalyzer.
See for example panel …
-
I am getting the following error when running fusion snakemake.
```
rule loose_fusions: …
f0t1h updated
2 years ago
-
During the gene prediction training step of the funannotate pipeline I am running into the following error:
Thread 8 terminated abnormally: Error, pasa binary [] isn't executable or couldn't be fo…
AlWa1 updated
2 years ago
-
Hello,everyone
I installed PASA with a conda environment. My command is :/data/00/user/user157/miniconda3/envs/pasa/opt/pasa-2.4.1/Launch_PASA_pipeline.pl -c align.conf -C -R -g Split-1.fa -t 1.Ma6.…
-
url where this behavior shows up:
0. https://www.artstation.com/projects/Ya9LZ3.json
1. https://www.artstation.com/artwork/Ya9LZ3
2. https://cdna.artstation.com/p/assets/images/images/023/424/12…