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### Description
N4BiasFieldCorrections fails on a subset of participants in one dataset that I've been testing. The subjects were all scanned on a Siemens Prisma.
### What I Did
```
N4BiasFi…
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# Currently
Our MRI loader searches for data in `anat` folder. See documentation [here](https://github.com/ivadomed/ivadomed/blob/34551756dd6cc3cbec7800a691683096d6a7305b/docs/source/data.rst).
…
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Fix some initialization of properties, e.g. `b0MoCo_Rotate_bvecs_sh` so that can be accesible globally.
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I ran into this one:
https://github.com/PennLINC/qsiprep/blob/429afc60781b74f58aa0e5d1eb9ab7433edc14bd/qsiprep/interfaces/confounds.py#L172
working with a dataset that has a pepolar acquisition…
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I am trying to convert a DTIPrep's output back to Nifti format, and the DWIConvert tool threw a segmentation fault error.
Here are details:
1. Convert original Nifti to Nrrd, DTIPrep only support…
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Hi,
My research group has recently used QSIprep, and would like some information on the DWI-to-T1 registration stage. While the majority of registrations were good, we noticed in a subset of images…
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We're using 3dVolreg (from AFNI), copying the procedures from BOLD counterparts. In the long term, I think education should do this better than anything else, but in the short term, we may want to tal…
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We are currently missing a summary at the head of the DWI individual report.
In addition to the standard information we plot for BOLD, I'd like to see:
- Number of low-bs/b=0s and whether they a…
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Hello,
Although UKFTractography completed without error for most of my cases, I have 3 cases that threw the following error. Any insight is appreciated - thank you!
(pnlpipe3) [root@4d78e987681…
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[https://drive.google.com/file/d/15l4IBfNUTdOwQL6rY2H6ekpwfaeNIfPj/view?usp=sharing](url)
"The fully-preprocessed data" provided by the author includes
| -- t2.npy
|---Dwi.npy
|---Dwi_ldmk_1. npy …