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Got the whole spikesorting loop to run properly for tetrodes (thanks yall) but when running the same code for a probe I run into this error at `sgs.MetricCuration.populate(m_key)`:
```
Cell In[15]…
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Hi everybody,
I am confused since I noticed a mismatch in the channel maps generated in my Jupyter notebook and Phy reading the same kilosort2.5 sorting_output. For example, in the attached screens…
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Hi,
I'm trying to compare sorter outputs over days and tried using the compare_multiple_templates function.
I get this error:
ValueError: Shape of passed values is (191, 191), indices imply (19…
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Hi all,
I am performing the switch on my pipeline to the **SortingAnalyzer object** instead of WaveformsExtractor and I have some questions on it.
1. Does all the methods related to the wavefor…
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Hello,
I'd like to export to Phy and be able to visualize the amplitudes and principal components. I'm able to run the following code without errors, but when I load into Phy, the amplitudes and p…
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Dear developers !
I am using 0.99.1 SpikeInterface on windows10, my computer has 64GB RAM, and I meet some problems when I try to learn something from the tutorial. BrokenProcessPool seems to occur e…
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Hi! I am working with spikeGLX data and using the 'spike_times.py' and 'spike_clusters.py' outputs from kilosort 2.5 to convert into spiketrains list for downstream analysis in Elephant package. Howev…
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Hi 👋,
I'm getting this error `polyorder must be less than window_length` and the algorithm hangs there. I think I have something misconfigured but I'm not really sure what that might be. The data i…
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Our data is collected by Intan devices in RHD format, which is then converted into raw files and stored using spikeinterface. We then read the raw files again and obtain MUA (Multi-Unit Activity) thro…
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Is there a built-in function to extract spike timepoints for each unit? I am looking to get spike timepoints to find units that fire at the same timepoints or have correlated firing of some sort.