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Improve the antibiotic and carbon source's input on the YAML file. Currently, it is only a true/false field, but we should capture much more information about it. For the moment, set it as text file t…
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I found that the issue in the labeler pulling the same tweet is that our database contains tweets with the same text but different id's, sometimes upwards of 20-30 times.
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It would be good to know what taxa are used in OBO, and have a script to build a little tree of them.
I used the Ontobee SPARQL endpoint http://sparql.hegroup.org/sparql/ to run variations on this …
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An interesting point was raised by Aya: how can we be sure the plasmid contained in the mother cell will be transferred to the minicell?
It was then suggested that we look at the iGEM Vilnius-Lithu…
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Hello!When I run the basenji_data.py,I met some problems.
python basenji_data.py -d .1 -g data/unmap_macro.bed -l 196608 --local -o data/heart_l131k -p 8 -t .1 -v .1 -w 128 data/test.fna data/heart_w…
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["facultative" is a permissible value for `rel_to_oxygen`](https://github.com/GenomicsStandardsConsortium/mixs/blob/74744eea9b149b0587b58f48e3dd8d1f879820d2/model/schema/terms.yaml#L13559-L13567)
W…
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I've been trying to get off the ground with uBin (again) and have a few questions, that you can hopefully help me with:
When I try running uBin_wrapper.sh on the example_dataset (see output below),…
Dwrgi updated
11 months ago
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How do you handle place and time fields, mostly geography and spacial data fields, for captive bred individuals? Other than putting the "collecting source" as captive. In searching data on Arctos, dif…
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I'm looking for feedback on the current version of the [bulk TNRS mapping tool](https://devtree.opentreeoflife.org/curator/tnrs/) on **devtree**. In particular, I'm interested in these questions. Most…
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Dear developer,
I use metawrap blobology module to visualize the community. But all the plots are on the x-axis. I find the coverage of all contigs in file (final_assembly.blobplot) is 0. I…