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there are two ways this could be implemented:
1. create a file in /tmp and delete it when the program exits as part of the cleanup hook
2. emulate a file via an in-memory buffer. this could be used…
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Hi Quentin
I haven't managed to find any information about how IGoR handles allelic variants presented in models. In default models some IGHV, TRAV and TRBV genes have several alleles (up to 7) and…
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Hi!
We've tried to use FACETS to call genome wide CNAs in a paired tumor-normal case, but we are not sure about optimizing parameters like ndepth, snp.nbhd etc. to get reliable segmentation and CN …
BZ532 updated
5 years ago
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I'm sure this has been discussed elsewhere and I don't know when, or if, we'll have time to implement it, but I think it's worth adding here.
Currently Python `str`s (`PyUnicodeObject` in C) are im…
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The current Jacobian helper function implementation in `gradient.py` seems like it might be slower than it needs to be. Given a vector output (size _N_) of a graph with a vector input (size _M_), it c…
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Sourcegraph's selection color looks ugly compared to GoLand or VS Code in dark mode. We should fix that.
type Mon…
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Gather observations from literature on how strains and antigen types within strains compete and are affected by immunity.
Should be some overlap with Philip's initial 1.0 mechanism for search in var…
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Writing some test cases for symbolic allele parsing, I've encountered some problems with the SV specifications when dealing with multiple SV alt alleles since only some fields support multiple alleles…
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I kindly ask to copy some attachement of specific files (Invoices, normaly as PDF or jpg or doc) to a standarized place (invoice-inbox) on my computer . (This would help me to save a lot of time on …