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Following the [implementation of Curl](https://github.com/WordPress/wordpress-playground/issues/1008), I tried to use [my plugin](https://playground.wordpress.net/?plugin=lumiere-movies) with playgrou…
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Hi!
I'm having trouble with the output of the script smmipcollasper.py in tools. A large portion of my reads have rejected SAM flags. What flags are causing this? How can I avoid filtering via SAM…
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Hello, I'm having an issue with CNVkit where my batch command with a custom .cnn reference is exiting (with an exit code 0) in the middle of the run, not generating a .cns file.
The runs I performe…
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Hi,
I encountered the issue about "paired reads have different names" in some of my sequencing data. The data are PE reads generated from MiSeq.
The bwa commands I used were as follows:
```
$ …
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Hello,
I only have one fastq file for the sample. When running the amplicanPipeline function I get an error that my forward file is blank, but my forward file column contains the name of my fastq f…
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`core::ptr::write_volatile` and `core::ptr::read_volatile` are documented as being intended to act on I/O memory, i.e. for MMIO. These are indeed widely used by many crates providing drivers for MMIO …
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Hello!
I'm working with a portion of the COI gene in ants, and have been using minibar to demultiplex my reads. We've developed our own indexes, here's an example of what they look like from my inp…
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`/K ` reads a char from input, reads it one at a time, so if try to type in 3 its ok, but if you type 235, it displays 2 then exits to the prompt.
suggestion
1. allow longer numbers to read …
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The nbases argument in learnErrors is set to 1e8 by default, i.e. 100 million = 100 000 000 bases to use for error rate learning. Still, I often see messages like this:
```
2304931075 total bases …
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This is just to let you know about a compilation error that we have observed
on Apery's CI: https://github.com/coq-community/apery/commit/18a6456d7d42b7872cb62880ccecd24992d5cbec
The error messag…