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Hi, I am having the same issue as previous (https://github.com/SpikeInterface/probeinterface/issues/95) with macos. I am also trying to import manufacturer Cambridge Neurotech and probe name ASSY-77-P…
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I am running Windows 11 machine with 64 GB RAM and a GPU. I'm running SpikeInterface 0.99.1 and running sorters in Docker. I got this error using both kilosort 2 as well as kilosort3 both crashing aft…
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Hello, I get a consistent error when I run the `run_sorter` function with `docker=True`. I have tried this with a number of sorters such as `'ironclust'`, `'kilosort3'`, `'mountainsort5'`, `'herdingsp…
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### What happened?
If environment has Pydantic v2 installed, an error is raised when importing modules from Neuroconv.
since we have #264 going on, this should be fixed when updating everything to P…
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Hi,
I’m trying to use Kilosort 2.0 to process data obtained from 8 tetrodes in OpenEphys. The data file is in the correct format and the number of channels in the recording correspond to the number…
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**Describe the bug**
- When populating `SpikeSorting`, a temp directory is created in spyglass. spikesorting_sorting.py, line 196:
`sorter_temp_dir = tempfile.TemporaryDirectory(dir=temp_dir)`
-…
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- [x] Plot probe spike rate over course of experiment to check for slow drift
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https://github.com/AllenInstitute/npc_sessions/blob/3d7341507a45915dbae82d96b233d49ed050f35d/src/npc_sessions/utils/units.py#L193
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We need to:
* [x] Remove references to `fast_templates` in core.rst and in tutorials
* [x] Add section to explain operators. ie get waveforms for more complex operators or just get avg without wav…
zm711 updated
7 months ago
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Hi,
I have a question.
Imagine there are two sub recordings that have to be analyzed together (via GLX extractor, then KS2). How would it work considering there are in the same folder?. I mean, …