-
```
Error in nrow(mx.first) : object 'mx.first' not found
> traceback()
4: nrow(mx.first)
3: referenceSet(cnts, groups, p.thresh = 0.1)
2: runCoda(cnts, groups, n.boot = n.boot, n.seed = n.seed, …
-
Not an actual issue with your code, but by any chance you could you add umap coordinates to your metadata file processed_droplet_obs_data.csv? I am currently re-making the Fig 2 object to have colname…
-
pour info
https://stackoverflow.com/questions/7041147/how-do-you-calculate-cyclomatic-complexity-for-r-functions
````R
> library(cyclocomp)
> cyclocomp_package_dir(path = ".")
…
-
Hello,
I am trying to parse the `abundance.h5` into an R session.
Using `h5dump('abundance.h5')` from the `rhdf5` package, all I get is multiple rows of this:
```
Error in H5Dread(h5dataset …
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Hi (and thanks for creating this tool!)
I am running ggpicrust2 one function at a time but struggling with the pathway_errorbar function.
_My code_
kegg_abundance
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When I run `FindTransferAnchors` on my Seurat Object v5, the function stops with:
```
Error in (function (cond) :
error in evaluating the argument 'x' in selecting a method for function 't': E…
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Hi,
When I was running LinkPeaks(), I got an error. Because my Matrix version is 1.5-3.
```r
Error: as(, "dgTMatrix") is deprecated since Matrix 1.5-0; do as(., "TsparseMatrix") instead
```
In Ma…
-
Hi
After running the following on a new linux build
```
df
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Hi monocle3 group,
I ran the example data following https://cole-trapnell-lab.github.io/monocle3/docs/trajectories/ and tried to subset cells by branch in linux non-interactively.
```
cells.br…
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When I used function cola_report，the following four functions are shown as not found.
How can I fix this problem? Thank you very much.
![image](https://user-images.githubusercontent.com/55424563/1…